![]() ![]() Parallelization of Sealer has also been improved, thanks to contributions by 13, 2018 This release provides bug fixes and modest improvements to Bloom filter assembly contiguity/correctness. This release improves scaffold N50 on human by ~10%, due to implementation of a new `-median` option for `DistanceEst` (thanks to This release also adds a new `-max-cost` option for `konnector` and `abyss-sealer` that curbs indeterminately long running times, particularly at low k values. This release fixes a SAM-formatting bug that broke the ABySS-LR pipeline (Tigmint/ARCS). On human, Bloom filter assembly times are still a few hours longer than MPI assemblies (e.g. Bloom filter assemblies now have equivalent scaffold contiguity and better correctness than MPI assemblies of the same data, while still requiring less than 1/10th of the memory. This release provides major improvements to Bloom filter assembly contiguity and correctness. GitHub release page for ABySS All Releases VersionĬompiler fixes and increase stack size limits to avoid stack overflows. Gordon Robertson, Jacqueline Schein, Readman Chiu, Richard Corbett, Matthew Field, Shaun D Jackman, Karen Mungall, Sam Lee, Hisanaga Mark Okada, Jenny Q Qian, Malachi Griffith, Anthony Raymond, Nina Thiessen, Timothee Cezard, Yaron S Butterfield, Richard Newsome, Simon K Chan, Rong She, Richard Varhol, Baljit Kamoh, Anna-Liisa Prabhu, Angela Tam, YongJun Zhao, Richard A Moore, Martin Hirst, Marco A Marra, Steven J M Jones, Pamela A Hoodless Marco A Marra, Steven J M Jones, Pamela A Hoodless and İnanç Birol.
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